cyto_plot_custom: Create custom cyto_plot

In DillonHammill/CytoExploreR: Interactive Analysis of Cytometry Data

Create custom cyto_plot

Description

Signal to cyto_plot that a custom plot is being created to ensure that plots are appropraitely saved with cyto_plot_save. cyto_plot_custom calls must be made before cyto_plo_save calls and cyto_plot calls should be followed by a call to cyto_plot_complete to indicate when the plot is complete and should be saved.

Usage

cyto_plot_custom(layout = NULL)

Arguments

layout

either a vector of the form c(nrow, ncol) defining the dimensions of the plot or a matrix defining a more sophisticated layout (see layout). Vectors can optionally contain a third element to indicate whether plots should be placed in row (1) or column (2) order, set to row order by default.

Author(s)

Dillon Hammill ([e-mail])

Examples

## Not run: 
library(CytoExploreRData)

# Activation flowSet
fs <- Activation

# Save plot
cyto_plot_save("Test.png",
               height = 7,
               width = 14)

# Create custom plot - 1D & 2D plot panels
cyto_plot_custom(layout = c(1,2))
cyto_plot(fs[[32]],
          channels = "FSC-A")
cyto_plot(fs[[32]],
          channels = c("FSC-A","SSC-A"))

# Signal plot is complete and save
cyto_plot_complete()

## End(Not run)

DillonHammill/CytoExploreR documentation built on March 2, 2023, 7:34 a.m.