cit.genomOrder: cit.genomOrder

Description Usage Arguments

View source: R/palimpsest_utils.R

Description

cit.genomOrder

Usage

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cit.genomOrder(
  d,
  chrom = "chrom",
  pos = "pos",
  startPos = "start",
  endPos = "end",
  chromNum = "chrNum"
)

Arguments

d

data.frame

chrom

chromosome column name

pos

sequence location column name

startPos

the column in d giving the start base pair position

endPos

the column in d giving the end base pair position

chromNum

the name of added column whith chromosome from 1 to 24


FunGeST/Palimpsest documentation built on June 10, 2021, 6:35 p.m.