cit.genomOrder: cit.genomOrder

In FunGeST/Palimpsest: Package

cit.genomOrder

Description

cit.genomOrder

Usage

cit.genomOrder(
  d,
  chrom = "chrom",
  pos = "pos",
  startPos = "start",
  endPos = "end",
  chromNum = "chrNum"
)

Arguments

d	data.frame
chrom	chromosome column name
pos	sequence location column name
startPos	the column in d giving the start base pair position
endPos	the column in d giving the end base pair position
chromNum	the name of added column whith chromosome from 1 to 24

FunGeST/Palimpsest documentation built on June 2, 2024, 4:21 a.m.