Description Usage Arguments Examples
View source: R/annotate_VCF_functions.R
Orders a VCF by Sample name, then genomic position within each sample and project (if project argument given).
1 |
vcf |
The VCF to be ordered. |
Project_col |
Name of the Project column in the VCF (if any) (e.g. may contain "ICGC"). If a value is given, the samples are sorted by project first, then sample etc.. |
1 | vcf <- order_vcf(vcf, Project_col = "Project")
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