palimpsest_DissectSigs: palimpsest_DissectSigs

In FunGeST/Palimpsest: Package

Description

Function to plot temporal dissection of mutational signatures within a sample

Usage

palimpsest_DissectSigs(
  vcf = NULL,
  signatures_exp_clonal = NULL,
  signatures_exp_subclonal = NULL,
  sig_cols = NULL,
  resdir = NULL
)

Arguments

vcf	vcf data frame containing the mutations
signatures_exp_clonal	Mutational signature exposures extracted from clonal mutations only using deconvolution_fit function.
signatures_exp_subclonal	Mutational signature exposures extracted from subclonal mutations only using deconvolution_fit function.
sig_cols	Character vector indicating the colors representing each signature in graphical outputs. Must match to the total number of provided signatures
resdir	Result directory

FunGeST/Palimpsest documentation built on June 10, 2021, 6:35 p.m.