systemJava: Calls the Java executable

In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework

Description

Calls the Java executable.

Usage

## Default S3 method:
systemJava(..., jvmArgs=Sys.getenv("JVM_ARGS"), .fmtArg=c(`( |=)$` = "%s%s",
  `.*` = "%s %s"), .fake=FALSE, verbose=FALSE)

Arguments

...	Additional arguments specifying Java command line switches.
.fmtArg	A named character vector specifying how command line options are formatted, e.g. "-f bar" vs "--foo=bar".
.fake	If TRUE, the executable is not called.
verbose	See Verbose.

Author(s)

Henrik Bengtsson

HenrikBengtsson/aroma.seq documentation built on Feb. 15, 2021, 2:21 a.m.