R/findBWA.R

In HenrikBengtsson/aroma.seq: High-Throughput Sequence Analysis using the Aroma Framework

Defines functions findBWA

Documented in findBWA

findBWA <- function(...) {
  # Aroma-specific variable
  path <- getExternalHome("BWA_HOME")
  versionPattern <- c("Version:[ ]*([0-9.-_]+).*")
  findExternal(command="bwa", path=path, versionPattern=versionPattern, ...)
}