splatPopSimGeneMeans: Simulate gene means for splatPop
In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data

splatPopSimGeneMeans

R Documentation

Simulate gene means for splatPop

Description

Simulate outlier expression factors for splatPop. Genes with an outlier factor not equal to 1 are replaced with the median mean expression multiplied by the outlier factor.

Usage

splatPopSimGeneMeans(sim, params, base.means.gene)

Arguments

`sim`	SingleCellExperiment to add gene means to.
`params`	SplatParams object with simulation parameters.
`base.means.gene`	List of gene means for sample from matrix generated by 'splatPopSimulateMeans' and with the sample specified in 'splatPopSimulateSC'.