splatSimGeneMeans: Simulate gene means
In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data
View source: R/splat-simulate.R
splatSimGeneMeans R Documentation
Simulate gene means
Description
Simulate gene means from a gamma distribution. Also simulates outlier
expression factors. Genes with an outlier factor not equal to 1 are replaced
with the median mean expression multiplied by the outlier factor.
Usage
splatSimGeneMeans(sim, params)
Arguments
sim
SingleCellExperiment to add gene means to.
params
SplatParams object with simulation parameters.
Value
SingleCellExperiment with simulated gene means.
Oshlack/splatter documentation built on April 1, 2024, 9:37 a.m.
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View source: R/splat-simulate.R
| splatSimGeneMeans | R Documentation |
Simulate gene means
Description
Simulate gene means from a gamma distribution. Also simulates outlier expression factors. Genes with an outlier factor not equal to 1 are replaced with the median mean expression multiplied by the outlier factor.
Usage
splatSimGeneMeans(sim, params)
Arguments
sim |
SingleCellExperiment to add gene means to. |
params |
SplatParams object with simulation parameters. |
Value
SingleCellExperiment with simulated gene means.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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