splatSimTrueCounts: Simulate true counts
In Oshlack/splatter: Simple Simulation of Single-cell RNA Sequencing Data
View source: R/splat-simulate.R
splatSimTrueCounts R Documentation
Simulate true counts
Description
Simulate a true counts matrix. Counts are simulated from a poisson
distribution where Each gene in each cell has it's own mean based on the
group (or path position), expected library size and BCV.
Usage
splatSimTrueCounts(sim, params)
Arguments
sim
SingleCellExperiment to add true counts to.
params
SplatParams object with simulation parameters.
Value
SingleCellExperiment with simulated true counts.
Oshlack/splatter documentation built on Dec. 10, 2024, 3:48 p.m.
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View source: R/splat-simulate.R
| splatSimTrueCounts | R Documentation |
Simulate true counts
Description
Simulate a true counts matrix. Counts are simulated from a poisson distribution where Each gene in each cell has it's own mean based on the group (or path position), expected library size and BCV.
Usage
splatSimTrueCounts(sim, params)
Arguments
sim |
SingleCellExperiment to add true counts to. |
params |
SplatParams object with simulation parameters. |
Value
SingleCellExperiment with simulated true counts.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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