summariseDiff: Summarise diffSCESs

Description Usage Arguments Value Examples

View source: R/compare.R

Description

Summarise the results of diffSCEs. Calculates the Median Absolute Deviation (MAD), Mean Absolute Error (MAE) and Root Mean Squared Error (RMSE) for the various properties and ranks them.

Usage

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Arguments

diff

Output from diffSCEs

Value

data.frame with MADs, MAEs, RMSEs, scaled statistics and ranks

Examples

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sim1 <- splatSimulate(nGenes = 1000, batchCells = 20)
sim2 <- simpleSimulate(nGenes = 1000, nCells = 20)
difference <- diffSCEs(list(Splat = sim1, Simple = sim2), ref = "Simple")
summary <- summariseDiff(difference)
head(summary)

Oshlack/splatter documentation built on Sept. 3, 2018, 5:38 a.m.