dot-RNAseq_grouped_boxplot: Grouped box plots of RNA expression across tumors

In a3609640/eIF4F.analysis: A R package to analyze eIF4F subunits in human cancers

Grouped box plots of RNA expression across tumors

Description

This function takes the output of .RNAseq_all_gene() function and generate box plots of differential gene expression across all TCGA cancer types This function should not be used directly, only inside .plot_boxgraph_RNAseq_TCGA()function.

Side effect: box plots on screen and as pdf file to compare relative expression of EIF genes across all TCGA cancer type

Usage

.RNAseq_grouped_boxplot(df)

Arguments

df	output dataset from .RNAseq_all_gene(.TCGA_GTEX_RNAseq_sampletype_subset), which was generated inside .plot_boxgraph_RNAseq_TCGA()function.

See Also

Other helper function for differential expression plotting: .RNAratio_boxplot(), .RNAseq_boxplot(), .violinplot()

a3609640/eIF4F.analysis documentation built on Jan. 2, 2023, 11:19 p.m.