TMBs_WES: WES-based TMB to use as input to the correlateTMBvalues and...
In acc-bioinfo/TMBleR: Tumor Mutational Burden Quantification From Gene Panels And WES

Table comntaining estimated tumor mutational burden and metadata (smaple, filter, size of the sequenced genomic space) obtained by WES.

TMBs_WES

A data frame with 4 rows and 5 variables

Sample: factor, sample identifier
Filter: factor, type of filter, if any, applied on input mutations
Sequencing_Size: numeric vector, genomic size targeted by the sequencing experiment (WES or Panel), in Mb
Tot_Number_Mutations: numeric vector, tumor mutational burden in the targeted genomic region
TMB_per_Mb: numeric vector, global tumor mutational burden expressed as number of mutations

generated in house as an example of TMB estimated obtained by WES.

acc-bioinfo/TMBleR documentation built on Dec. 18, 2021, 10:21 p.m.

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