filterCOSMIC: Filter variants described in COSMIC
In acc-bioinfo/TMBleR: Tumor Mutational Burden Quantification From Gene Panels And WES
Description
Usage
Arguments
Value
Author(s)
Description
This function removes from the input variants those described in COSMIC
Usage
1
filterCOSMIC(vcf, assembly)
Arguments
vcf
a data.frame object containing variants
assembly
human genome assembly to use: "hg19" or "hg38"
Value
Returns a CollapsedVCF object with variants not described in COSMIC
Author(s)
Laura Fancello
acc-bioinfo/TMBleR documentation built on Dec. 18, 2021, 10:21 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
Description
This function removes from the input variants those described in COSMIC
Usage
1 | filterCOSMIC(vcf, assembly)
|
Arguments
vcf |
a |
assembly |
human genome assembly to use: "hg19" or "hg38" |
Value
Returns a CollapsedVCF object with variants not described in COSMIC
Author(s)
Laura Fancello
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.