dot-remove_noncoding_SNV: .remove_noncoding_SNV
In acc-bioinfo/TMBleR: Tumor Mutational Burden Quantification From Gene Panels And WES
Description
Usage
Arguments
Value
Description
This helper function removes from a VariantAnnotation VCF object the
SNV mapped in non coding regions
Usage
1
.remove_noncoding_SNV(vcf, assembly)
Arguments
vcf
VariantAnnotation vcf object
assembly
hg19 or hg38
Value
Granges object
acc-bioinfo/TMBleR documentation built on Dec. 18, 2021, 10:21 p.m.
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Description Usage Arguments Value
Description
This helper function removes from a VariantAnnotation VCF object the SNV mapped in non coding regions
Usage
1 | .remove_noncoding_SNV(vcf, assembly)
|
Arguments
vcf |
VariantAnnotation vcf object |
assembly |
hg19 or hg38 |
Value
Granges object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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