generateBoxplot: Generate boxplots of TMB distribution versus clinical...

Description Usage Arguments Value Examples

View source: R/generateBoxplot.R

Description

This function generates boxplots representing the distribution of TMB values between immunotherapy responders and nonresponders.

Usage

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generateBoxplot(TMB_clinical)

Arguments

TMB_clinical

dataframe generated by annotateTMB()

Value

boxplot

Examples

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#' # Import datasets
data(TMB_VanAllen)
data("VanAllen_Clinical")
# Annotate TMB with clinical reponse
TMB_clincal_response <- annotateTMB(TMB_df = TMB_VanAllen, ClinicalData = VanAllen_Clinical )

# generate plot
generateBoxplot(TMB_clincal_response)

acc-bioinfo/TMBleR documentation built on Dec. 18, 2021, 10:21 p.m.