plotTMB: Plots Tumor Mutational Burden (TMB)
In acc-bioinfo/TMBleR: Tumor Mutational Burden Quantification From Gene Panels And WES
Description
Usage
Arguments
Value
Author(s)
Description
This function reads in input the output of applyTMB() function and plots it
Usage
1
Arguments
TMB_results
a data.frame with sample, filter, sequencing size,
total number of mutations and number of mutations per megabase.
type
a string describing the type of plot to generate: 'barplot',
'densityplot' or boxplot.
Value
Returns a pot representing TMB per Mb given in input for of all
samples and with every applied filter separately
Author(s)
Laura Fancello
acc-bioinfo/TMBleR documentation built on Dec. 18, 2021, 10:21 p.m.
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Description Usage Arguments Value Author(s)
Description
This function reads in input the output of applyTMB() function and plots it
Usage
1 |
Arguments
TMB_results |
a |
type |
a string describing the type of plot to generate: 'barplot', 'densityplot' or boxplot. |
Value
Returns a pot representing TMB per Mb given in input for of all samples and with every applied filter separately
Author(s)
Laura Fancello
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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