ArchR_ClustRes: ArchR function: Plot multiple cluster resolutions
In alexthiery/scHelper: R package containing helper functions for single cell analysis
View source: R/ArchR_ClustRes.R
ArchR_ClustRes R Documentation
ArchR function: Plot multiple cluster resolutions
Description
This function plots UMAPs for a series of nine cluster resolutions, alongside a clustree which reveals the relationship between clusters at different resolutions
Usage
ArchR_ClustRes(ArchR, by = 0.1, starting_res = 0)
Arguments
ArchR
ArchR object
by
value by which resolution is incremented
starting_res
lowest resolution to cluster cells by
Value
plot generated by grid extra
alexthiery/scHelper documentation built on Aug. 26, 2023, 3:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/ArchR_ClustRes.R
| ArchR_ClustRes | R Documentation |
ArchR function: Plot multiple cluster resolutions
Description
This function plots UMAPs for a series of nine cluster resolutions, alongside a clustree which reveals the relationship between clusters at different resolutions
Usage
ArchR_ClustRes(ArchR, by = 0.1, starting_res = 0)
Arguments
ArchR |
ArchR object |
by |
value by which resolution is incremented |
starting_res |
lowest resolution to cluster cells by |
Value
plot generated by grid extra
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.