ArchR_PseudoreplicateCounts: ArchR function: Plot table of cell counts in pseudoreplicates

In alexthiery/scHelper: R package containing helper functions for single cell analysis

ArchR function: Plot table of cell counts in pseudoreplicates

Description

This function prints a table of how many cells are in each pseudoreplicate and how many samples and clusters are they made of

Usage

ArchR_PseudoreplicateCounts(
  ArchR = ArchR,
  pseudo_replicates,
  group_by = "Sample"
)

Arguments

ArchR	ArchR object
pseudo_replicates	object created by Archr::addGroupCoverages
group_by	ArchR metadata to group by (e.g. "Sample")

Value

table of cell counts for each pseudoreplicate across groups

alexthiery/scHelper documentation built on Aug. 26, 2023, 3:42 p.m.