SubsetGeneModules: Subset Antler gene modules based on selected gene list...

View source: R/SubsetGeneModules.R

SubsetGeneModulesR Documentation

Subset Antler gene modules based on selected gene list provided

Description

Subset Antler gene modules based on selected gene list provided

Usage

SubsetGeneModules(
  gms,
  selected_genes,
  keep_mod_ID = FALSE,
  selected_gene_proportion = 0
)

Arguments

gms

List of gene modules obtained from Antler

selected_genes

array of genes used to filter gene module list

keep_mod_ID

boolean value for whether to keep original gene module ID

selected_gene_proportion

ratio of selected genes which must be present in order for the module to be kept


alexthiery/scHelper documentation built on Aug. 26, 2023, 3:42 p.m.