SEACells_SummariseGeneScoreMatrix: SEACells function: Summarises gene score counts across...
In alexthiery/scHelper: R package containing helper functions for single cell analysis
View source: R/SEACells_SummariseGeneScoreMatrix.R
SEACells_SummariseGeneScoreMatrix R Documentation
SEACells function: Summarises gene score counts across SEACells
Description
This function takes ATAC gene score matrix and adds up gene score counts across SEACells
Usage
SEACells_SummariseGeneScoreMatrix(matrix, dictionary)
Arguments
matrix
exported gene score matrix from SEACells
dictionary
dataframe with two columns: 'index' (single cell ID) and 'SEACell' (SEACell ID)
Value
dataframe with summarised gene counts which can be used to make a seurat object of SEACells
alexthiery/scHelper documentation built on Aug. 26, 2023, 3:42 p.m.
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View source: R/SEACells_SummariseGeneScoreMatrix.R
| SEACells_SummariseGeneScoreMatrix | R Documentation |
SEACells function: Summarises gene score counts across SEACells
Description
This function takes ATAC gene score matrix and adds up gene score counts across SEACells
Usage
SEACells_SummariseGeneScoreMatrix(matrix, dictionary)
Arguments
matrix |
exported gene score matrix from SEACells |
dictionary |
dataframe with two columns: 'index' (single cell ID) and 'SEACell' (SEACell ID) |
Value
dataframe with summarised gene counts which can be used to make a seurat object of SEACells
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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