ArchR_ExtractMeansFromSe: ArchR function: Extract mean matrix from se object
In alexthiery/scHelper: R package containing helper functions for single cell analysis

ArchR_ExtractMeansFromSe

R Documentation

ArchR function: Extract mean matrix from se object

This function takes seMarker and extracts the mean matrix for heatmap plotting

ArchR_ExtractMeansFromSe(seMarker, Log2norm = TRUE, scaleTo = 10^4)

`seMarker`	the se object created `ArchR::getMarkerFeatures`
`Log2norm`	boolean to log2 normalize the matrix + scale for cluster size
`scaleTo`	scale factor to multiply by

means matrix for plotting

alexthiery/scHelper documentation built on Aug. 26, 2023, 3:42 p.m.

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