Files in barzine/barzinePhdData
Data to be used with barzinePhdR
.Rbuildignore
.gitattributes
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/data.R
R/misc.R
README.md
appveyor.yml
barzinePhdData.Rproj
data/Tiger23Tissues.rda
data/Tiger4Tissues.rda
data/TissueCol_12.rda
data/TissueCol_17.rda
data/TissueCol_21.rda
data/TissueCol_23.rda
data/TissueCol_62.rda
data/brawand.htseq.fpkm.pooled.rda
data/brawand.htseq.fpkm.rda
data/brawand.htseq.raw.pooled.rda
data/brawand.htseq.raw.rda
data/castle.htseq.fpkm.rda
data/castle.htseq.raw.rda
data/completePalette.rda
data/cutler.top3.rda
data/datalist
data/datasetCol.rda
data/g.Pcoding.rda
data/g.mitoch.rda
data/gene.mapID.rda
data/geneInfoEns76.rda
data/goAnnot.76.rda
data/gtex.cufflinks.fpkm.pooled.rda
data/gtex.cufflinks.tpm.pooled.rda
data/gtex.htseq.fpkm.pooled.rda
data/gtex.htseq.tpm.pooled.rda
data/ibm.htseq.fpkm.rda
data/ibm.htseq.raw.rda
data/kuster.ppkm.all.rda
data/kuster.ppkm.rda
data/kuster.ppm.all.rda
data/kuster.ppm.rda
data/kuster.top3.all.rda
data/kuster.top3.rda
data/pandey.ppkm.15.rda
data/pandey.ppkm.rda
data/pandey.ppm.15.rda
data/pandey.ppm.rda
data/pandey.top3.15.rda
data/pandey.top3.rda
data/selectTigerGenes.rda
data/smallerSubsetTigerMix.rda
data/uhlen.cufflinks.fpkm.pooled.rda
data/uhlen.cufflinks.fpkm.pooled.tech.rda
data/uhlen.cufflinks.fpkm.rda
data/uhlen.cufflinks.raw.pooled.rda
data/uhlen.cufflinks.raw.pooled.tech.rda
data/uhlen.cufflinks.raw.rda
data/uhlen.cufflinks.tpm.pooled.rda
data/uhlen.cufflinks.tpm.pooled.tech.rda
data/uhlen.cufflinks.tpm.rda
data/uhlen.htseq.fpkm.pooled.rda
data/uhlen.htseq.fpkm.pooled.tech.rda
data/uhlen.htseq.fpkm.rda
data/uhlen.htseq.raw.pooled.rda
data/uhlen.htseq.raw.pooled.tech.rda
data/uhlen.htseq.raw.rda
data/uhlen.htseq.tpm.pooled.rda
data/uhlen.htseq.tpm.pooled.tech.rda
data/uhlen.htseq.tpm.rda
inst/extdata/E-GEOD-30352_map.tsv
inst/extdata/E-MTAB-2836_map.tsv
inst/extdata/E-MTAB-2836_pooled_tech_map.tsv
inst/extdata/E-MTAB-305_map.tsv
inst/extdata/E-MTAB-513_map.tsv
inst/extdata/EnsembleGenePPKM_V3_Kuster.txt
inst/extdata/EnsembleGenePPKM_V3_Pandey.txt
inst/extdata/EnsembleGenePPM_V3_Kuster.txt
inst/extdata/EnsembleGenePPM_V3_Pandey.txt
inst/extdata/Pandey_Gene_Expression_Tissues_V2.txt
inst/extdata/cutler_expression_filtered.txt
inst/extdata/cutler_expression_table.txt
inst/extdata/kuster_expression_filtered.txt
inst/extdata/kuster_expression_table.txt
inst/extdata/pandey_expression_filtered.txt
inst/extdata/pandey_expression_table.txt
man/NAto0.Rd
man/Tiger23Tissues.Rd
man/Tiger4Tissues.Rd
man/TissueCol_12.Rd
man/TissueCol_17.Rd
man/TissueCol_21.Rd
man/TissueCol_23.Rd
man/TissueCol_62.Rd
man/brawand.htseq.fpkm.Rd
man/brawand.htseq.fpkm.pooled.Rd
man/brawand.htseq.raw.Rd
man/brawand.htseq.raw.pooled.Rd
man/castle.htseq.fpkm.Rd
man/castle.htseq.raw.Rd
man/completePalette.Rd
man/cutler.top3.Rd
man/datasetCol.Rd
man/extractWithTag.Rd
man/extractWithinSampleAbundance.Rd
man/extractWithinSampleTop3Abundance.Rd
man/fixNamesBrawand.Rd
man/fixNamesCutler.Rd
man/fixNamesGtex.Rd
man/fixNamesKuster.Rd
man/fixNamesPandey.Rd
man/fixNamesUhlen.Rd
man/g.Pcoding.Rd
man/g.mitoch.Rd
man/gene.mapID.Rd
man/geneInfoEns76.Rd
man/goAnnot.76.Rd
man/gtex.cufflinks.fpkm.pooled.Rd
man/gtex.cufflinks.tpm.pooled.Rd
man/gtex.htseq.fpkm.pooled.Rd
man/gtex.htseq.tpm.pooled.Rd
man/ibm.htseq.fpkm.Rd
man/ibm.htseq.raw.Rd
man/kuster.ppkm.Rd
man/kuster.ppkm.all.Rd
man/kuster.ppm.Rd
man/kuster.ppm.all.Rd
man/kuster.top3.Rd
man/kuster.top3.all.Rd
man/mergeUterus.Rd
man/pandey.ppkm.15.Rd
man/pandey.ppkm.Rd
man/pandey.ppm.15.Rd
man/pandey.ppm.Rd
man/pandey.top3.15.Rd
man/pandey.top3.Rd
man/removeClusters.Rd
man/selectTigerGenes.Rd
man/simpleCap.Rd
man/smallerSubsetTigerMix.Rd
man/uhlen.cufflinks.fpkm.Rd
man/uhlen.cufflinks.fpkm.pooled.Rd
man/uhlen.cufflinks.fpkm.pooled.tech.Rd
man/uhlen.cufflinks.raw.Rd
man/uhlen.cufflinks.raw.pooled.Rd
man/uhlen.cufflinks.raw.pooled.tech.Rd
man/uhlen.cufflinks.tpm.Rd
man/uhlen.cufflinks.tpm.pooled.Rd
man/uhlen.cufflinks.tpm.pooled.tech.Rd
man/uhlen.htseq.fpkm.Rd
man/uhlen.htseq.fpkm.pooled.Rd
man/uhlen.htseq.fpkm.pooled.tech.Rd
man/uhlen.htseq.raw.Rd
man/uhlen.htseq.raw.pooled.Rd
man/uhlen.htseq.raw.pooled.tech.Rd
man/uhlen.htseq.tpm.Rd
man/uhlen.htseq.tpm.pooled.Rd
man/uhlen.htseq.tpm.pooled.tech.Rd
vignettes/.gitignore
vignettes/dataPreparation.Rmd
