duplicateReference: Duplicate a reference Granges (exon-level) for each...

In betsig/GeneStructureTools: Tools for spliced gene structure manipulation and analysis

Description

Duplicate a reference Granges (exon-level) for each diff-splicing event/transcript combination required.

Usage

duplicateReference(betweenExons, exons)

Arguments

betweenExons	data.frame with related differential splicing event ids and reference transcript_ids
exons	reference exons GRanges

Value

Granges with transcripts duplicated

Author(s)

Beth Signal

See Also

Other rmats data processing: altIntronRmats(), altSpliceSiteRmats(), annotateEventCoords(), annotateOverlapRmats(), betweenNumbers(), exonsToIntrons(), extractEvent(), filterRmatsEvents(), readRmatsDataSet(), reformatExons(), removeDuplicatePairs(), removeExonsBetween(), rmatsTranscriptChangeSummary(), skipExonByJunction(), splitLongExons()

betsig/GeneStructureTools documentation built on March 31, 2021, 4:43 a.m.