API for betsig/GeneStructureTools
Tools for spliced gene structure manipulation and analysis

Global functions
DEXSeqIdsToGeneIds Man page Source code
UTR2UTR53 Man page Source code
addBroadTypes Man page Source code
addIntronInTranscript Man page Source code
annotateGeneModel Man page Source code
attrChangeAltSpliced Man page Source code
cumsumANDpad Man page Source code
filterGtfOverlap Man page Source code
filterSignificantWhippetEvents Man page Source code
findDEXexonType Man page Source code
findExonContainingTranscripts Man page Source code
findIntronContainingTranscripts Man page Source code
findJunctionPairs Man page Source code
formatJunctions Man page Source code
formatWhippetEvents Man page Source code
getOrfs Man page Source code
makeGeneModel Man page Source code
maxLocation Man page Source code
orfDiff Man page Source code
orfSimilarity Man page Source code
overlapTypes Man page Source code
readWhippetDIFFfiles Man page Source code
readWhippetJNCfiles Man page Source code
readWhippetPSIfiles Man page Source code
removeDuplicateTranscripts Man page Source code
removeVersion Man page Source code
reorderExonNumbers Man page Source code
replaceJunction Man page Source code
skipExonInTranscript Man page Source code
summariseExonTypes Man page Source code
transcriptChangeSummary Man page Source code
whippetTranscriptChangeSummary Man page Source code
betsig/GeneStructureTools documentation built on Jan. 14, 2018, 9:09 a.m.