makeNewLeafExonsUnanchored: Create new exon ranges for a cryptic unachored splice...
In betsig/GeneStructureTools: Tools for spliced gene structure manipulation and analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Description
Create new exon ranges for a cryptic unachored splice junction
Usage
1
makeNewLeafExonsUnanchored(altIntronLocs, junctionRanges, clusterExons)
Arguments
clusterExons
GRanges of annotated exons from the target gene
junctionGRanges
GRanges of splice junction (must be intron version)
Value
GRanges object with new exons
Author(s)
Beth Signal
See Also
Other leafcutter splicing isoform creation:
alternativeIntronUsage(),
leafcutterIntronsToExons(),
makeNewLeafExons(),
readLeafcutterJunctions()
betsig/GeneStructureTools documentation built on March 31, 2021, 4:43 a.m.
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Description Usage Arguments Value Author(s) See Also
Description
Create new exon ranges for a cryptic unachored splice junction
Usage
1 | makeNewLeafExonsUnanchored(altIntronLocs, junctionRanges, clusterExons)
|
Arguments
clusterExons |
GRanges of annotated exons from the target gene |
junctionGRanges |
GRanges of splice junction (must be intron version) |
Value
GRanges object with new exons
Author(s)
Beth Signal
See Also
Other leafcutter splicing isoform creation:
alternativeIntronUsage(),
leafcutterIntronsToExons(),
makeNewLeafExons(),
readLeafcutterJunctions()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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