splitLongExons: Split long exons in two if they overlap an event
In betsig/GeneStructureTools: Tools for spliced gene structure manipulation and analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Description
Split long exons in two if they overlap an event
Usage
1
splitLongExons(betweenExons, gtfTranscripts)
Arguments
betweenExons
data.frame with related differential splicing event ids and reference transcript_ids
gtfTranscripts
Granges with altered transcript structures
Value
Granges with altered transcript structures
Author(s)
Beth Signal
See Also
Other rmats data processing:
altIntronRmats(),
altSpliceSiteRmats(),
annotateEventCoords(),
annotateOverlapRmats(),
betweenNumbers(),
duplicateReference(),
exonsToIntrons(),
extractEvent(),
filterRmatsEvents(),
readRmatsDataSet(),
reformatExons(),
removeDuplicatePairs(),
removeExonsBetween(),
rmatsTranscriptChangeSummary(),
skipExonByJunction()
betsig/GeneStructureTools documentation built on March 31, 2021, 4:43 a.m.
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Description Usage Arguments Value Author(s) See Also
Description
Split long exons in two if they overlap an event
Usage
1 | splitLongExons(betweenExons, gtfTranscripts)
|
Arguments
betweenExons |
data.frame with related differential splicing event ids and reference transcript_ids |
gtfTranscripts |
Granges with altered transcript structures |
Value
Granges with altered transcript structures
Author(s)
Beth Signal
See Also
Other rmats data processing:
altIntronRmats(),
altSpliceSiteRmats(),
annotateEventCoords(),
annotateOverlapRmats(),
betweenNumbers(),
duplicateReference(),
exonsToIntrons(),
extractEvent(),
filterRmatsEvents(),
readRmatsDataSet(),
reformatExons(),
removeDuplicatePairs(),
removeExonsBetween(),
rmatsTranscriptChangeSummary(),
skipExonByJunction()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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