assignCellType: Based on MarkerCombinationAnnotation table from...
In caitlinjones/halo: Development version of the package 'halo', which analyzes and visualizes Halo data
Description
Usage
Arguments
Value
Description
Based on MarkerCombinationAnnotation table from flattenMetaData(), assign a cell type
to a combination in marker combination table
Usage
1
assignCellType(combinationRow, cellTypes, conditionalTypes, totalCellCount)
Arguments
combinationRow
table row from marker combination table
cellTypes
table describing known marker combinations, containing at least
Marker_combination and Cell_type columns
conditionalTypes
table of conditional cell types (*NOTE* this is not implemented yet)
Value
character string indicating cell type of given combination
caitlinjones/halo documentation built on May 7, 2019, 8 a.m.
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Description Usage Arguments Value
Description
Based on MarkerCombinationAnnotation table from flattenMetaData(), assign a cell type to a combination in marker combination table
Usage
1 | assignCellType(combinationRow, cellTypes, conditionalTypes, totalCellCount)
|
Arguments
combinationRow |
table row from marker combination table |
cellTypes |
table describing known marker combinations, containing at least Marker_combination and Cell_type columns |
conditionalTypes |
table of conditional cell types (*NOTE* this is not implemented yet) |
Value
character string indicating cell type of given combination
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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