View source: R/melanoma_spatial.R
Given a list of distances from a tumor boundary, or 'interface bins', calculate area for each bin using a sobol grid
1 2 | computeBandAreasMC(tumorBoundariesList, bb, interfaceBins, nGrid = 100,
maxSeg = 1000, exclusionB)
|
tumorBoundariesList |
a list where each element is a tibble containing tumor boundaries returned from readHaloAnnotations() |
bb |
a list containing X0,X1,Y0,Y1 representing the boundary of the trimmed FOV |
interfaceBins |
vector of distances (integers) that define each band; default = (-20:20)*10 |
nGrid |
number of random points to use for area calculations; default=100 |
maxSeg |
maximum segments to divide long boundary segments into; default=1000 |
exclusionsB |
a list where each element is a tibble containing exclusion boundaries returned from readHaloAnnotations() |
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