getCellTypes: Make list of all known cell types (marker combinations) given...

Description Usage Arguments Value

View source: R/process_meta.R

Description

Make list of all known cell types (marker combinations) given in meta data files

Usage

1
getCellTypes(simpleTypes, complexTypes)

Arguments

simpleTypes

straight-forward markercombination-cellType pairs

complexTypes

table describing combinations that are not exactly straight-forward (described in meta data format documentation)

unreasonableCombinations

**NOTE: WILL MOST LIKELY BE ELIMINULLTED**

Value

list of two elements: CellTypes and Conditional, where CellTypes are ALL known markercombination-cellType pairs and Conditional is a vector describing cell types that are conditional based on the data itself


caitlinjones/halo documentation built on May 7, 2019, 8 a.m.