cellDive.loadAllData: Load data from each rda file into one table

Description Usage Arguments Value

View source: R/interface.R

Description

Read each data file, select the minimum columns required for downstream analyses and store as one table in memory. Columns include: Sample SubSample SPOT UUID Marker XMin/Max YMin/Max Value Data is filtered for cells whose EXCLUDE value == "" and ValueType == "Positive"

Usage

1
cellDive.loadAllData(projectParams, whichFileSet)

Arguments

projectParams

key-value pairs of project parameters in list format

whichFileSet

name of key (minus "_dir" and "_files" suffixes) of files to be loaded (e.g., 'raw_data' or 'data' or 'rethresholded_data')

Value

tibble containing all data required for downstream analysis


caitlinjones/halo documentation built on May 7, 2019, 8 a.m.