getAreaPerBand: Compute lattice of boundary bins

In caitlinjones/halo: Development version of the package 'halo', which analyzes and visualizes Halo data

Description

Given an annotation file and halo infiltration data, compute tibble of Sample, FOV, Halo Version, MaxG, Band, Area, Halo

Usage

getAreaPerBand(allBoundaries, sample, fov, maxG, outDir = NULL, bb = NULL,
  writeCSVfiles = FALSE, interfaceBins = NULL)

Arguments

sample	sample name
fov	FOV
maxG	maximum factor of 10 to use for generating random points on grid [ REWORD??? ]
outDir	if writeCSVfiles=TRUE, files will be written here
bb	a list containing X0,X1,Y0,Y1 representing the boundary of the trimmed FOV
writeCSVfiles	write lattice band area file in csv format; default=FALSE
interfaceBins	vector of distances (integers) that define each band; default = (-20:20)*10
aFile	Halo boundary annotation file in XML format

Details

*NOTE: formerly computeBoundaryBinsLattice

Value

tibble

caitlinjones/halo documentation built on May 7, 2019, 8 a.m.