API for compbiomed/BatchQC
Batch Effects Quality Control Software
| Global functions | |
|---|---|
| BatchQC | Man page Source code |
| DE_analyze | Man page Source code |
| EV_plotter | Man page Source code |
| EV_table | Man page Source code |
| PCA_plotter | Man page Source code |
| batch_correct | Man page Source code |
| batch_design | Man page Source code |
| batch_indicator | Man page |
| batchqc_explained_variation | Man page Source code |
| bladder_data_upload | Man page Source code |
| check_valid_input | Man page Source code |
| color_palette | Man page Source code |
| combat_correction | Man page Source code |
| combat_seq_correction | Man page Source code |
| confound_metrics | Man page Source code |
| cor_props | Man page Source code |
| counts2pvalue | Man page Source code |
| covariates_not_confounded | Man page Source code |
| cramers_v | Man page Source code |
| dendrogram_alpha_numeric_check | Man page Source code |
| dendrogram_color_palette | Man page Source code |
| dendrogram_plotter | Man page Source code |
| get.res | Man page Source code |
| goodness_of_fit_DESeq2 | Man page Source code |
| heatmap_num_to_char_converter | Man page Source code |
| heatmap_plotter | Man page Source code |
| nb_histogram | Man page Source code |
| nb_proportion | Man page |
| normalize_SE | Man page Source code |
| plot_data | Man page Source code |
| preprocess | Man page Source code |
| process_dendrogram | Man page Source code |
| protein_data | Man page |
| protein_sample_info | Man page |
| pval_plotter | Man page Source code |
| pval_summary | Man page Source code |
| ratio_plotter | Man page Source code |
| signature_data | Man page |
| std_pearson_corr_coef | Man page Source code |
| summarized_experiment | Man page Source code |
| variation_ratios | Man page Source code |
| volcano_plot | Man page Source code |
