confound_metrics: Combine std. Pearson correlation coefficient and Cramer's V
In compbiomed/BatchQC: Batch Effects Quality Control Software
View source: R/summary_statistics.R
confound_metrics R Documentation
Combine std. Pearson correlation coefficient and Cramer's V
Description
Combine std. Pearson correlation coefficient and Cramer's V
Usage
confound_metrics(se, batch)
Arguments
se
summarized experiment
batch
batch variable
Value
metrics of confounding
Examples
library(scran)
se <- mockSCE()
confound_table <- BatchQC::confound_metrics(se, batch = "Mutation_Status")
confound_table
compbiomed/BatchQC documentation built on April 23, 2024, 7:38 a.m.
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View source: R/summary_statistics.R
| confound_metrics | R Documentation |
Combine std. Pearson correlation coefficient and Cramer's V
Description
Combine std. Pearson correlation coefficient and Cramer's V
Usage
confound_metrics(se, batch)
Arguments
se |
summarized experiment |
batch |
batch variable |
Value
metrics of confounding
Examples
library(scran)
se <- mockSCE()
confound_table <- BatchQC::confound_metrics(se, batch = "Mutation_Status")
confound_table
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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