batch_design: This function allows you to make a batch design matrix
In compbiomed/BatchQC: Batch Effects Quality Control Software
View source: R/summary_statistics.R
batch_design R Documentation
This function allows you to make a batch design matrix
Description
This function allows you to make a batch design matrix
Usage
batch_design(se, batch, covariate)
Arguments
se
summarized experiment
batch
batch variable
covariate
biological covariate
Value
design table
Examples
library(scran)
se <- mockSCE()
batch_design_tibble <- batch_design(se, batch = "Mutation_Status",
covariate = "Treatment")
batch_design_tibble
compbiomed/BatchQC documentation built on Nov. 16, 2024, 5:47 a.m.
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View source: R/summary_statistics.R
| batch_design | R Documentation |
This function allows you to make a batch design matrix
Description
This function allows you to make a batch design matrix
Usage
batch_design(se, batch, covariate)
Arguments
se |
summarized experiment |
batch |
batch variable |
covariate |
biological covariate |
Value
design table
Examples
library(scran)
se <- mockSCE()
batch_design_tibble <- batch_design(se, batch = "Mutation_Status",
covariate = "Treatment")
batch_design_tibble
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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