combat_correction: ComBat Correction This function applies ComBat correction to...

ComBat_correctionR Documentation

ComBat Correction This function applies ComBat correction to your summarized experiment object

Description

ComBat Correction This function applies ComBat correction to your summarized experiment object

Usage

ComBat_correction(se, assay_to_normalize, batch, covar, output_assay_name)

Arguments

se

SummarizedExperiment object

assay_to_normalize

Assay that should be corrected

batch

The variable that represents batch

covar

list of covariates

output_assay_name

name of results assay

Value

SE object with an added ComBat corrected array


compbiomed/BatchQC documentation built on Feb. 9, 2025, 10:21 p.m.