combat_correction: ComBat Correction This function applies ComBat correction to...
In compbiomed/BatchQC: Batch Effects Quality Control Software
ComBat_correction R Documentation
ComBat Correction
This function applies ComBat correction to your summarized experiment object
Description
ComBat Correction
This function applies ComBat correction to your summarized experiment object
Usage
ComBat_correction(se, assay_to_normalize, batch, covar, output_assay_name)
Arguments
se
SummarizedExperiment object
assay_to_normalize
Assay that should be corrected
batch
The variable that represents batch
covar
list of covariates
output_assay_name
name of results assay
Value
SE object with an added ComBat corrected array
compbiomed/BatchQC documentation built on Feb. 9, 2025, 10:21 p.m.
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| ComBat_correction | R Documentation |
ComBat Correction This function applies ComBat correction to your summarized experiment object
Description
ComBat Correction This function applies ComBat correction to your summarized experiment object
Usage
ComBat_correction(se, assay_to_normalize, batch, covar, output_assay_name)
Arguments
se |
SummarizedExperiment object |
assay_to_normalize |
Assay that should be corrected |
batch |
The variable that represents batch |
covar |
list of covariates |
output_assay_name |
name of results assay |
Value
SE object with an added ComBat corrected array
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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