Global functions | |
---|---|
aggregateScoreChangePerGene | Man page Source code |
annotationFromScores | Source code |
arrangePlots | Man page Source code |
assignCellsByScores | Man page |
classificationTreeToDf | Man page Source code |
createClassificationTree | Man page |
deriveHierarchy | Man page |
diffuseGraph | Man page Source code |
diffuseScorePerType | Man page Source code |
estimateDNegativeScores | Source code |
estimateNewNegativeScores | Source code |
estimatePariwiseNegativeScoreChange | Source code |
expandAnnotationToClusters | Source code |
extractCellTypeProbs | Man page |
extractMarkersFromSubtypes | Man page Source code |
getAnnotationConfidence | Source code |
getAnnotationPerParent | Man page Source code |
getCellTypeScoreInfo | Man page |
getClassificationData | Man page |
getMarkerScoreInfo | Man page |
getMarkerScoresPerCellType | Man page |
getTopNegativeGenes | Man page |
hierarchyToClassificationTree | Man page |
markerListToMarkup | Man page |
mergeAnnotationByLevels | Man page |
mergeAnnotationToLevel | Man page Source code |
mergeScoreInfos | Man page |
mergeScores | Man page |
normalizeTCWithFeatures | Man page |
normalizeTfIdfWithFeatures | Man page |
parseMarkerFile | Man page |
plapply | Man page Source code |
plotAnnotationByLevels | Source code |
plotAssignmentScores | Man page Source code |
plotConfidenceByLevels | Source code |
plotGeneExpression | Man page |
plotMarkerListViolinMap | Man page |
plotOneUncertaintyPerClust | Man page |
plotSubtypeMarkers | Man page Source code |
plotTypeHierarchy | Source code |
plotTypeMarkers | Man page Source code |
plotUncertaintyPerCell | Man page Source code |
plotUncertaintyPerClust | Man page |
prepareDeInfo | Man page |
scoreCellUncertaintyPerLevel | Man page |
scoreClusterUncertaintyPerLevel | Man page |
scorePerCellUncertainty | Man page Source code |
selectMarkersPerType | Man page |
sparseColMax | Source code |
sparseRowMax | Source code |
unifyGeneIds | Source code |
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