CHANGELOG.md

In khodosevichlab/CellAnnotatoR: Automated marker-based cell type annotation

[0.2.2] - 2022-06-29

Fixed

• Fixed function calls for Conos updates

[0.2.1] - 2020-09-03

Added

• extractCellTypeProbs function for estimating annotation proabilities
• Validations for missed subtypes in expansion to clusters

Fixed

• Fixed wrong normalization in normalizeTfIdf
• Fixed bug in marker selection

[0.2.0] - 2020-04-24

Added

• "expressed uniq" field in the markup file for markers with expression, unique for the cell type
• Added multiple input validations

Fixed

• Fixed multiple bugs
• Removed Garnett dependency
• Made cm parameter orientation consistent

[0.1.2] - 2020-01-02

Added

• max.depth parameter for annotation
• title.size parameter for plotting functions

[0.1.1] - 2019-11-29

Fixed

• Fixed naming bug

[0.1.0] - 2019-11-27

First somehow stable version

khodosevichlab/CellAnnotatoR documentation built on June 29, 2022, 9:12 p.m.