tests/testthat/test_annotation.R
In khodosevichlab/CellAnnotatoR: Automated marker-based cell type annotation
context("Annotation")
test_that("normalization works", {
cm <- matrix(runif(200), nrow=25)
cm.tfidf <- normalizeTfIdfWithFeatures(cm)
expect_true(all(dim(cm.tfidf) == dim(cm)))
cm.tc <- normalizeTCWithFeatures(cm)
expect_true(all(dim(cm.tc) == dim(cm)))
expect_true(all(abs(apply(cm.tc, 1, max) - 1) < 1e-10))
})
khodosevichlab/CellAnnotatoR documentation built on June 29, 2022, 9:12 p.m.
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context("Annotation")
test_that("normalization works", {
cm <- matrix(runif(200), nrow=25)
cm.tfidf <- normalizeTfIdfWithFeatures(cm)
expect_true(all(dim(cm.tfidf) == dim(cm)))
cm.tc <- normalizeTCWithFeatures(cm)
expect_true(all(dim(cm.tc) == dim(cm)))
expect_true(all(abs(apply(cm.tc, 1, max) - 1) < 1e-10))
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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