API for mckaylab/TSPmap
A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps

Global functions
MSTcallTSP Man page Source code
MSTgetGroup Man page Source code
TSPmap2distancedf Man page Source code
addMarkerNames Man page Source code
addRfs Man page Source code
addStampToFilename Man page Source code
autoClusterMST Man page Source code
autoMergeClusters Man page Source code
callConcorde Man page Source code
callLKH Man page Source code
capRFmat Man page Source code
checkNongroupEdges Man page Source code
cleanrfmat Man page Source code
computeHaldane Man page Source code
computeKosambi Man page Source code
computeRFmat Man page Source code
createMST Man page Source code
createMap Man page Source code
createTSPFile Man page Source code
distancedf2table Man page Source code
findZeroes Man page Source code
findcuts Man page Source code
finddups Man page Source code
matchGroups Man page Source code
matchGroups2 Man page Source code
pareMatrix Man page Source code
plotTSPsoln Man page Source code
processConcordeOutput Man page Source code
processLKHOutput Man page Source code
readFile Man page Source code
rearrangeGroup Man page Source code
removeMarkers Man page Source code
removedups Man page Source code
reorderMarkers Man page Source code
reverseCluster Man page Source code
reverseGroup Man page Source code
selectGroup Man page Source code
shiftTSPsoln Man page Source code
sortRFmatrix Man page Source code
tspOrder Man page Source code
tspOrder2 Source code
writeOutput Man page Source code
writeRFmat Man page Source code
writeSortedRFmat Man page Source code
mckaylab/TSPmap documentation built on Jan. 25, 2018, 3:55 p.m.