writeRFmat: writes the recombination frequency matrix to a file

In mckaylab/TSPmap: A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps

Description

This function writes the recombination frequency matrix to a file, along with the marker names in both the header row and header column. File format: 1. Comma-separated file

Usage

writeRFmat(filename, markerdata, rfmatrix)

Arguments

filename	- path and output filename as a string
markerdata	- main marker data file, produced by either the readfile.R/readFile function or the duplicatemarkers.R/removedups function
rfmatrix	- recombination frequency matrix, produced by the rfmatrix.R/computeRFmat function

Value

Rf matrix with marker names in the header row/column.

mckaylab/TSPmap documentation built on Aug. 19, 2021, 8:38 p.m.