shiftTSPsoln: Shift a TSP solution array when the endpoints don't line up...
In mckaylab/TSPmap: A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps
Description
Usage
Arguments
Value
Description
This function returns a list of the smallest edge weight between a given cluster and all other clusters. This is used to make the decision to merge clusters when the smallest edge weight is below a given threshold. You will want to re-run the findCuts function after running this method.
Usage
1
shiftTSPsoln(TSPsoln, startIndex)
Arguments
TSPsoln
- array of markers of a TSP solution
startIndex
- StartIndex is the index of the first cutpoint, which we will shift so that it is in position 1. If startIndex is not specified, the default value of 0 will cause the method to shift the solution array so that it ends at the largest rf value (since this is probably the best cutpoint).
Value
Array of markers in TSP solution order, but shifted to startIndex.
mckaylab/TSPmap documentation built on Aug. 19, 2021, 8:38 p.m.
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Description Usage Arguments Value
Description
This function returns a list of the smallest edge weight between a given cluster and all other clusters. This is used to make the decision to merge clusters when the smallest edge weight is below a given threshold. You will want to re-run the findCuts function after running this method.
Usage
1 | shiftTSPsoln(TSPsoln, startIndex)
|
Arguments
TSPsoln |
- array of markers of a TSP solution |
startIndex |
- StartIndex is the index of the first cutpoint, which we will shift so that it is in position 1. If startIndex is not specified, the default value of 0 will cause the method to shift the solution array so that it ends at the largest rf value (since this is probably the best cutpoint). |
Value
Array of markers in TSP solution order, but shifted to startIndex.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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