capRFmat: Cap the rf matrix according to the given threshold.
In mckaylab/TSPmap: A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps
Description
Usage
Arguments
Value
Description
For all recombination frequency value that are above the threshold parameter, this function raises these values to capval. This is done in order to reduce the runtime of the TSP solvers.
Usage
1
capRFmat(rfmat, threshold, capval)
Arguments
rfmat
- recombination frequency matrix.
threshold
- upper limit on meaningful rf values.
capval
- value to which rf values above threshold will be set.
Value
matrix of recombination frequency values, with all values above threshold set to capval
mckaylab/TSPmap documentation built on Aug. 19, 2021, 8:38 p.m.
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Description Usage Arguments Value
Description
For all recombination frequency value that are above the threshold parameter, this function raises these values to capval. This is done in order to reduce the runtime of the TSP solvers.
Usage
1 | capRFmat(rfmat, threshold, capval)
|
Arguments
rfmat |
- recombination frequency matrix. |
threshold |
- upper limit on meaningful rf values. |
capval |
- value to which rf values above threshold will be set. |
Value
matrix of recombination frequency values, with all values above threshold set to capval
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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