createMST: Create minimum spanning tree.
In mckaylab/TSPmap: A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps
Description
Usage
Arguments
Value
Description
This function creates a minimum spanning tree and breaks it into numcuts clusters.
Usage
1
createMST(rfmat, numcuts)
Arguments
rfmat
- recombination frequency matrix, produced by the rfmatrix.R/computeRFmat function
numcuts
- number of clusters you wish to break the MST into.
Value
List of numcuts+1 marker clusters.
mckaylab/TSPmap documentation built on Aug. 19, 2021, 8:38 p.m.
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Description Usage Arguments Value
Description
This function creates a minimum spanning tree and breaks it into numcuts clusters.
Usage
1 | createMST(rfmat, numcuts)
|
Arguments
rfmat |
- recombination frequency matrix, produced by the rfmatrix.R/computeRFmat function |
numcuts |
- number of clusters you wish to break the MST into. |
Value
List of numcuts+1 marker clusters.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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