rearrangeGroup: Merge two clusters.
In mckaylab/TSPmap: A tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps
Description
Usage
Arguments
Value
View source: R/rearrangeGroup.R
Description
Merge two clusters. This is done after finding the results of matchGroups and knowing which two groups are actually part of the same chromosome.=
Usage
1
rearrangeGroup(group1Index, group2Index, cutlist, pathData)
Arguments
group1Index
- index of the first group
group2Index
- index of the second group
cutlist
- cutlist array, produced by cutpoints.R/findcuts function
pathData
- TSP solution object, produced by TSPinterface.R/processConcordeOutput or TSPinterface.R/processLKHOutput
Value
List of the new cutpointArray and TSP solution, after the two groups have been merged.
Get the return values like this:
result = rearrangeGroup(1, 2, cutpointArray, TSPsolution)
newCutpointArray = result$v1
newTSPsolution = result$v2
mckaylab/TSPmap documentation built on Aug. 19, 2021, 8:38 p.m.
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Description Usage Arguments Value
View source: R/rearrangeGroup.R
Description
Merge two clusters. This is done after finding the results of matchGroups and knowing which two groups are actually part of the same chromosome.=
Usage
1 | rearrangeGroup(group1Index, group2Index, cutlist, pathData)
|
Arguments
group1Index |
- index of the first group |
group2Index |
- index of the second group |
cutlist |
- cutlist array, produced by cutpoints.R/findcuts function |
pathData |
- TSP solution object, produced by TSPinterface.R/processConcordeOutput or TSPinterface.R/processLKHOutput |
Value
List of the new cutpointArray and TSP solution, after the two groups have been merged. Get the return values like this: result = rearrangeGroup(1, 2, cutpointArray, TSPsolution) newCutpointArray = result$v1 newTSPsolution = result$v2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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