findAnalyteHasPathway: Find table of analyte has pathway from given pathway IDs...

View source: R/processNewRamp.R

findAnalyteHasPathwayR Documentation

Find table of analyte has pathway from given pathway IDs Aggregate ramp Id to ramp pathway Id GC is C or G

Description

Find table of analyte has pathway from given pathway IDs Aggregate ramp Id to ramp pathway Id GC is C or G

Usage

findAnalyteHasPathway(pathwayRampId, GC = "C", n = 10)

Arguments

pathwayRampId

a vector of ramp Pathway ID

GC

the analytes type that is either "C" for compound or "G" for gene

n

minimum analytes of which pathway to considered computing overlap

Value

A list with pathway rampID as name, a vector of analytes from this pathway as content.


ncats/RaMP-DB documentation built on May 6, 2022, 1:35 a.m.