rampFastPathFromSource: Fast search given a list of metabolites source Id

Description Usage Arguments Value

View source: R/rampQueryHelper.R

Description

Fast search given a list of metabolites source Id

Usage

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rampFastPathFromSource(sourceid, find_synonym = FALSE, conpass = NULL,
  dbname = "ramp", username = "root", host = "localhost")

Arguments

sourceid

a vector of synonym that need to be searched

find_synonym

bool if find all synonyms or just return same synonym

conpass

password for database access (string)

dbname

name of the mysql database (default is "ramp")

username

username for database access (default is "root")

host

host name for database access (default is "localhost")

Value

a list contains all metabolits as name and pathway inside.


ncats/RaMP-DB documentation built on Nov. 21, 2020, 7:41 p.m.