meffil.normalization.report: Generate report on normalization performance

View source: R/normalization-report.r

meffil.normalization.reportR Documentation

Generate report on normalization performance

Description

Generate HTML file that summarises the normalization.

Usage

meffil.normalization.report(
  normalization.summary,
  output.file = "normalization-report.md",
  author = "Analyst",
  study = "Illumina methylation data",
  ...
)

Arguments

normalization.summary

Output from meffil.normalization.summary.

output.file

Default = "meffil-normalization-report.html". If the file extension is not .htm, .html, .HTM or .HTML then output will be in markdown format.

author

Default = "Analyst". Author name to be specified on report.

study

Default = "Illumina methylation data". Study name to be specified on report.

...

Arguments to be passed to knitr::knit


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.