meffil.pcs: Calculate control probe PCs

In perishky/meffil: Efficient algorithms for DNA methylation

Calculate control probe PCs

Description

Calculate control probe PCs

Usage

meffil.pcs(qc.objects, fixed.effects = NULL, random.effects = NULL)

Arguments

qc.objects	A list of outputs from meffil.create.qc.object().
fixed.effects	Names of columns in samplesheet that should be included as fixed effects along with control matrix principal components (Default: NULL).
random.effects	Names of columns in samplesheet that should be included as random effects (Default: NULL).

Value

PCA of control probes

perishky/meffil documentation built on June 9, 2024, 5:59 p.m.