meffil.plot.detectionp.samples: Plot detection p values from idat files

meffil.plot.detectionp.samplesR Documentation

Plot detection p values from idat files

Description

Plot detection p values from idat files

Usage

meffil.plot.detectionp.samples(
  qc.objects,
  threshold = 0.05,
  colour.code = NULL
)

Arguments

qc.objects

From meffil.qc

threshold

Cut off value for proportion of CpGs with poor detection p values. Default 0.05

colour.code

Array of length n samples to colour code points. Defaults to NULL

Value

Data frame of results plus plot


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.