phredmean: calculate mean Phred scores from list of Q values
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
Description
This method calculates the mean quality value from a list of q-values;
handles the challenge of relative log-scaling of the Q and challenges of a
more linear mean; this avoids an artificial inflation of phred-scores
Usage
1
Arguments
q
is a vector of q values
Value
mean phred scaled q-value
Examples
1
2
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
Description
This method calculates the mean quality value from a list of q-values; handles the challenge of relative log-scaling of the Q and challenges of a more linear mean; this avoids an artificial inflation of phred-scores
Usage
1 |
Arguments
q |
is a vector of q values |
Value
mean phred scaled q-value
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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